expand new method of parse the ootology

reqtool/reqman/api/reqman/apps/reqtool/rest_api/services/parse_ontologies.py

 from rdflib import Graph
-from rdflib.namespace import RDFS
+from rdflib.namespace import RDFS,URIRef, RDF
 
 #from subprocess import call
 
@@ -7,17 +7,15 @@ from rdflib.namespace import RDFS
 
 Ontology_file = "../../Ontologies/Mokos_18_1_7_47.ttl"
 
-list_of_DSO = ["DSO", "DSO-AOCS", "DSO-AOCS-instances"]
+list_of_DSO = ["http://delab.csd.auth.gr/ontologies/2018/DSO#", "http://delab.csd.auth.gr/ontologies/2018/DSO-AOCS#", "http://delab.csd.auth.gr/ontologies/2018/DSO-AOCS-instances#"]
 list_of_RMO = ["RMO", "RMO-instances", "DSO-AOCS-instances", "<http://delab.csd.auth.gr/ontologies/2018/RDO-instances"]
 
-
+g = Graph()
+g.load(Ontology_file, format="turtle")
 
 def findsubclass():
     file2 = open(r"../../Ontologies/instances.txt","w+") 
 
-    g = Graph()
-    g.load(Ontology_file, format="turtle")
-
     for subj, obj in g.subject_objects(predicate=RDFS.subClassOf):
         subClass = subj + "$"+ obj + "\n"
         file2.write(subClass)
@@ -31,12 +29,19 @@ def findsubclass():
 
 def get_instances(keyword):
     in_list = []
+    out_list = []
     with open('../../Ontologies/instances.txt') as f:
         for data in f:
             if (data.strip()).endswith(keyword):
                 spliter_1 = data.split('$')
                 spliter_2 = spliter_1[0].split("#")
                 in_list.append(spliter_2[len(spliter_2) - 1])
-    return tuple((str(n), str(n)) for n in in_list)
+    for extra in in_list:
+        for uri in list_of_DSO:
+            p = URIRef(uri +extra)
+            for s, p, o in g.triples((None, RDF.type, p)):
+                split = s.split("#")
+                out_list.append(split[len(split) - 1])
+    return tuple((str(n), str(n)) for n in (in_list + out_list))
 
 

reqtool/test_scripts/instances.py

 from rdflib import Graph
 from rdflib.namespace import RDFS
+from rdflib import ConjunctiveGraph, URIRef, RDFS, RDF, Namespace
 
 def get_instances(keyword):
+    an_list=[]
     with open('instances.txt') as f:
         for data in f:
             if (data.strip()).endswith(keyword):
                 spliter_1 = data.split('$')
                 spliter_2 = spliter_1[0].split("#")
-                print(spliter_2[len(spliter_2) - 1])
+                an_list.append(spliter_2[len(spliter_2) - 1])
+    return an_list
 
 file2 = open(r"instances.txt","w+") 
 
 g = Graph()
 g.load("../Ontologies/Mokos_18_1_7_47.ttl", format="turtle")
 
-for subj, obj in g.subject_objects(predicate=RDFS.range):
+#EAGLEYE cannot find
+
+for subj, obj in g.subject_objects(predicate=RDFS.subClassOf):
     subClass = subj + "$"+ obj + "\n"
     file2.write(subClass)
 
-get_instances("SAO#State")
+l = get_instances("SAO#System")
+
+for i in l:
+    p = URIRef("http://delab.csd.auth.gr/ontologies/2018/DSO#" +i)
+    for s, p, o in g.triples((None, RDF.type, p)):
+        print(s)
+